Tools

Alignment Analysis   Databases   Computational Immunology   Modelling & 3D-structure     Analysis   Sequence Manipulation &     Analysis   Similarity Searches   View all Tools		Tools    >> Episopt EPITOPE VACCINE OPTIMIZATION SERVER Plea for Support If you have found this resource useful for your research, please, tell to SPAIN RESEARCH AGENCY (direccion@aei.gob.es, secretaria.general@aei.gob.es) & U.C.M. Research Office (sec.investigacion@ucm.es, vr.investigacion@ucm.es). Your support is crucial to keep it up and running. Description: EPISOFT predicts epitope HLA I binding profiles and computes population protection (PPC). It also identifies minimal sets of epitopes that reach a target PPC for 5 distinct user-selected ethnic groups. CTL EPITOPES Paste sequences (Replace provided example) YLLPRRGPR KTSERSQPR LPGCSFSIF LLPRRGPRL GQIVGGVYL DPRRRSRNL GFADLMGYI ITYSTYGKF LIFCHSKKK RLGVRATRK Or, upload sequence POPULATION PROTECTION COVERAGE (PPC) Ethnic Group Target PPC All Black Caucasian Hispanic Native North American Asian 95% 90% 80% 75% 60% 50% Citation: Molero-Abraham M, Lafuente EM1, Flower DR, Reche PA (2013) Selection of conserved epitopes from hepatitis C virus for pan-populational stimulation of T-cell responses. Clin Dev Immunol. 2013:601943. doi: 10.1155/2013/601943. Epub 2013 Nov 21. Praises and Complaints: Pedro A. Reche   Hits since June/2013 Last updated: Contact Us    |   Immunomedicine Group    |